RNA Structure and Dynamics

RNA Structure and Dynamics

Ding, Jienyu; Wang, Yun-Xing; Stagno, Jason R.

Springer-Verlag New York Inc.

10/2022

254

Mole

Inglês

9781071626894

15 a 20 dias

Descrição não disponível.
Co-transcriptional Assembly and Native Purification of Large RNA-RNA Complexes for Structural Analyses.- Probing RNA Structures and Interactions using Fluorescence Lifetime Analyses.- Characterizing Fluorescence Properties of Turn-on RNA Aptamers.- Probing Transient Riboswitch Structures via Single Molecule Accessibility Analysis.- Isothermal Titration Calorimetry Analysis of a Cooperative Riboswitch using an Interdependent-Sites Binding Model.- Application of Molecular Dynamics to Expand Docking Program's Exploratory Capabilities and to Evaluate Its Predictions.- Exploring the Binding Process of Cognate Ligand to add Adenine Riboswitch Aptamer by using Explicit Solvent Molecular Dynamics (MD) Simulation.- Prediction of Dynamic RBP-RNA Interactions using PrismNet.- High-resolution Atomic Force Microscopy Imaging of RNA molecules in solution.- 3D Structural Analysis of Long Non-coding RNA by Small Angle X-ray Scattering and Computational Modeling.- Combining Biophysical Methods for Structure-function Analyses of RNA in Solution.- Near-Atomic Resolution Cryo-EM Image Reconstruction of RNA.- Auto-DRRAFTER: Automated RNA Modeling Based on Cryo-EM Density.- X-ray Crystallography to Study Conformational Changes in a TPP Riboswitch.- Preparation of RNA Microcrystals for Serial Femtosecond Crystallography Experiments.- Mix-and-Inject Serial Femtosecond Crystallography to Capture RNA Riboswitch Intermediates.
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X-ray Crystallography;XFEL;riboswitches;NMR;RNA conformational trajectory